Subspecies identification of captive Orang Utan in Melaka based on D-loop mitochondria DNA

Siti Norsyuhada, Kamaluddin and Salmah, Yaakop and Wan Mohd, Razi Idris and Jeffrine Japning, Rovie-Ryan and Badrul Munir, Md Zain (2018) Subspecies identification of captive Orang Utan in Melaka based on D-loop mitochondria DNA. AIP Conference Proceedings, 1940 (020055). ISSN 0094-243X

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Abstract

Mitochondrial DNA of Bornean Orang Utan populations suggests that there are three different subspecies (Pongo pygmaeus pygmaeus; Sarawak & Northwest Kalimantan, P. p. wurmbii; Southern West Kalimantan and Central Kalimantan, P. p. morio; East Kalimantan and Sabah). The subspecies of Orang Utans in captivity are difficult to determine through morphological observation. Thus, misidentification by ranger or zoo staffs leads to unwanted consequences especially towards conservation efforts of Orang Utan. The main objective of this study was to identify the subspecies and the geographic origin of 10 Orang Utans in Zoo Melaka and A’ Famosa by using partial mitochondrial D-loop gene sequences. DNA of all individuals was extracted from FTA Card. Data analyses were performed using Maximum Parsimony, MP and Neighbor Joining, NJ. Molecular phylogeny analysis revealed that all the samples likely belong to one species of Sumatran Orang Utan (P. abelii) and three different subspecies of Bornean Orang Utans (P. p. pygmaeus, P. p. morio, and P. p. wurmbii). The results obtained in this study indirectly help the management of zoos in term of conservation and visitor’s education.

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